process example: process_pipe_1dΒΆ

This example shows how nmrglue can be used to process NMR data. In this script a 1D time domain NMRPipe file is processing into a 1D NMRPipe frequency domain file.

The data used in this example is available for download.

[source code]

#! /usr/bin/env python

import nmrglue as ng

# read in the file
dic, data ="nmrpipe_1d/test.fid")

# process the direct dimension
dic, data = ng.pipe_proc.sp(dic, data, off=0.35, end=0.98, pow=2, c=1.0)
dic, data = ng.pipe_proc.zf(dic, data, auto=True)
dic, data = ng.pipe_proc.ft(dic, data, auto=True)
dic, data =, data, p0=-17.7, p1=-36.0)
dic, data = ng.pipe_proc.di(dic, data)

# write out processed data
ng.pipe.write("1d_pipe.ft", dic, data, overwrite=True)

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