Construct a row-augmented A matrix. Equation 5 in Giangrande et al, 2012.
A is a block matrix given by:
Each block is of shape n_gates by n_gates making shape(\(\bf{A}\)) = (3 * n, 2 * n).
Note that \(\bf{M}\) contains some side padding to deal with edge issues
Parameters : | n_gates : int
filt : array
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Returns : | a : matrix
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